BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036D01SP1|AL430209
(951 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig339 1775 0.0
>3x_Contig339
Length = 1654
Score = 1775 bits (888), Expect = 0.0
Identities = 936/955 (98%), Gaps = 5/955 (0%)
Strand = Plus / Plus
Query: 1 gatcaattcaacgaagcatcgatcggattatcggtatggagacctgtgctattagccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gatcaattcaacgaagcatcgatcggattatcggtatggagacctgtgctattagccatt 390
Query: 61 gctgtcatctttctacgtaggattccagccgttttaacgtgtaagccagtgatacccgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gctgtcatctttctacgtaggattccagccgttttaacgtgtaagccagtgatacccgat 450
Query: 121 ataaagagttggcgtgaagctctgtttgttggtcatttcggaccaattggtgttggtgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ataaagagttggcgtgaagctctgtttgttggtcatttcggaccaattggtgttggtgct 510
Query: 181 atttttgctgctatattggccaggtctcagctagaggctcatgttaccggtgaagagacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 atttttgctgctatattggccaggtctcagctagaggctcatgttaccggtgaagagacc 570
Query: 241 ccacyaagagaaaawcchccyaagggaagtgagtactggcagttaawggccgttatttgg 300
|||| |||||||| || || ||||||||||||||||||||||||| |||||||||||||
Sbjct: 571 ccactaagagaaattcctcctaagggaagtgagtactggcagttaatggccgttatttgg 630
Query: 301 cccttggtttgcytcttagtgttgacatcaattatcgttcatgggt-cctcagttgctgt 359
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 631 cccttggtttgcttcttagtgttgacatcaattatcgttcatgggtgcctcagttgctgt 690
Query: 360 gtttacgctcggcc--gtcatttgaatactatwacawtgaccaaawctttcactgtccat 417
||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||
Sbjct: 691 gtttacgctcggcgcggtcatttgaatactattacattgaccaaatctttcactgtccat 750
Query: 418 acaacaaacggaaatggtttaacgtcaaaawggatggacagawtacctggattggaaaaa 477
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 751 acaacaaacggaaatggtttaacgtcaaaatggatggacagattacctggattggaaaaa 810
Query: 478 gagggcaggtcatattcyatacaccgtgtcgatacaatggcatctgatgctaccaaacca 537
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 gagggcaggtcatattctatacaccgtgtcgatacaatggcatctgatgctaccaaacca 870
Query: 538 cttaaaaagaacgacactgtagaaacaagtggaatccgtgctaaacctgttggtggtatg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 cttaaaaagaacgacactgtagaaacaagtggaatccgtgctaaacctgttggtggtatg 930
Query: 598 aaacgtcgcggtaaaaagtctaaaaagagaggattaagacatcgtggaaatggagctgaa 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 aaacgtcgcggtaaaaagtctaaaaagagaggattaagacatcgtggaaatggagctgaa 990
Query: 658 gagaagaatagcctagaaatcgaaagggaaattcgtcaaaaggaagcacaggcagcagct 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 gagaagaatagcctagaaatcgaaagggaaattcgtcaaaaggaagcacaggcagcagct 1050
Query: 718 tttgcactttctagagatgatgaaagtgatttaggagcaaagtcattcacctcattggag 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 tttgcactttctagagatgatgaaagtgatttaggagcaaagtcattcacctcattggag 1110
Query: 778 gatccaaattccttggaaaaacagcaacaaacttctttgaatagttctgag-gctgggca 836
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1111 gatccaaattccttggaaaaacagcaacaaacttctttgaatagttctgagcgctgggca 1170
Query: 837 agaaccgccacaaagacctgttcaatcttctgggaattacaccaaggcccacatttgctg 896
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1171 agaaccgccacaaagacctgttcaatcttct-ggaattacaccaaggcccacatttgctg 1229
Query: 897 atgaaaagatcccattccccagcagccaaatttctggcaattctgaagctgaatc 951
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1230 atgaaaagatcccattccccagcagccaaatttctggcaattctgaagctgaatc 1284
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5651
Number of Sequences: 1807
Number of extensions: 5651
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)